Computation in BioInformatics. Группа авторов
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Название: Computation in BioInformatics

Автор: Группа авторов

Издательство: John Wiley & Sons Limited

Жанр: Базы данных

Серия:

isbn: 9781119654766

isbn:

СКАЧАТЬ are able to study the stability and minimization of energy of proteins as well as protein bound complexes. It can be downloaded from http://www.gromacs.org.

      1.2.10 ADME Prediction

       MOLINSPIRATION: It provides a wide range of cheminformatic softwares and tools which supports manipulation and processing of molecules. It also includes SD file conversion, SMILES, fragmentation of molecules, creation of tautomers, and calculating molecular properties that are required in QSAR, modeling and designing of drugs, depiction of high quality molecule, and molecular database tools which supports substructure and similarity searches. Molinspiration is user friendly and can be easily accessed at https://www.molinspiration.com/.

Sr. no. Software name Description
1 DDDPlus It helps in dissolution and disintegration study.
2 GastroPlus Correlation for various formulations in in vivo and in vitro.
3 MapCheck It helps in comparing dose or fluency measurement.
AutoDock They help in evaluating the ligand-protein interaction.
5 Schrodinger They perform ligand-receptor docking.
6 GOLD They perform protein-ligand docking.
7 BioSuite It performs genome analyzing and sequence analyzing.
8 Maestro It involves molecular modeling analysis.
9 ArgusLab They perform Molecular docking calculations and provides molecular modeling package.
10 GRAMM Protein-protein docking and protein-ligand docking.
11 SYBYL-X Suite It involves molecular modeling and ligand-based designing.
12 Sanjeevini It can predict protein-ligand binding affinity.
13 PASS It can create and analysis of SAR models.
14 AMIDE (A Medical Image Data Examiner) They provide medical image analysis in molecular imaging.
15 Discovery Studio® Visualizer It helps in viewing and analyzing protein data.
16 Imaging Software SCGE-Pro They perform cytogenetic and DNA damage analysis.
17 Xenogen Living Image Software It involves in vivo imaging display and analysis.
18 GeneSpring It can identify variation across set of sample and for correction method in samples.
19 QSARPro It involves protein-protein interaction study.
REST 2009 Software They perform analysis of gene expression data.
21 EthoWatcher It performs behavior analysis.
22 MARS (Multimodal Animal Rotation System) It can perform animal activity tracking, enzyme activity, and nanoparticle tracking and delivery study.

      Bioinformatics plays an important role in defining and classifying the nucleotide compositions of human genome sequence. This field helps in identifying and analyzing a large number of biological drug targets, thereby greatly increasing the possibility of potential drugs. This approach provides strategies and algorithm to predict new drug targets and also stores and control available drug target information. The annual expenditure of developing a new drug has been reduced due to the application of bioinformatics in drug discovery. They play a major role in determining the variation of species on the basis of similarity or dissimilarity of gene structure or amino acid sequence in protein. The level of sequence similarity can also be determined using bioinformatics analysis tools. Bioinformatics techniques are mainly applied in two different phases of drug discovery. First is extracting interesting information. Second is finding important genes and proteins, thereby speeding the process СКАЧАТЬ